Python scripts for BrainVoyager

Introduction

Python-scripts (*.py) can be used from BrainVoyager 20.

  • For more information about Python in BrainVoyager, please see Rainer's BV blog and the BrainVoyager Users Guide
  • For Python in BrainVoyager documentation, please see "Python" > "Python Developer Guide" in the BrainVoyager menu
  • They are an addition to the scripts that are available in the folder /Documents/BrainVoyager/Extensions/PythonScripts/ after installation of BrainVoyager.
  • An unofficial list with Python commands in BrainVoyager can be found in this PDF
  • For the Brain Innovation GitHub page, please see https://github.com/BrainInnovation/ for example for code to create physiological noise regressors.
  • For a BrainVoyager file formats libraries in Python, see https://github.com/ofgulban/bvbabel (almost all formats) and https://github.com/fladd/brainvoyagertools (CTR, MDM, PRT, SDM, VOI formats).
  • For an analysis pipeline for 7T data using several software packages, have a look at https://github.com/27-apizzuti/AOM-VASO_project
  • For information about the Python language and some useful libraries, see: Python website and the SciPy website. Also, the JavaScript language can still be used in BrainVoyager, and on Mac, AppleScript can be used.